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Örebro University

School of Medicine Degree project, 15 ECTS January 2017

MicroRNA-132 in human urothelial

cell wound healing

Author: Behnaz Khalilzadeh Binicy, Med Stud Örebro University Supervisors: Clara Ibel Chamorro, PhD and Magdalena Fossum, MD, PhD, Associate professor Dept. Of Women’s and Children’s Health, Karolinska Institutet

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Abstract

Background: Malformations in the urogenital system are common. Some severe malformations require surgical treatment in order to reduce morbidity and mortality. Sometimes the surgical procedure is hindered by lack of native tissue for the repair. In these cases, non-urological tissues are often incorporated to the urinary system. Due to drawbacks with these interventions, there has been a great interest to develop regenerative medicine for urogenital reconstructive procedures. To accomplish this, better understanding of the molecular mechanisms in normal bladder wound healing is essential. The role of different microRNAs in wound healing in skin has been identified, and miR-132 has been reported as a key regulator in different stages of skin wound healing. Because keratinocytes and urothelial cells are both epithelial cells and share many similarities, it is relevant to study the role of miR-132 also in the bladder wound healing.

Aim: To measure the expression of miR-132 in human urothelial cells using an in

vitro wound healing migration assay.

Method: Urothelial cells were isolated from a bladder biopsy and expanded in vitro until passage 2. Thereafter the cells were plated in petri dishes, and cultured until confluent. An in vitro scratch wound healing assay was then performed and the cells were collected and analysed at 6, 12 and 24 hours after scratching. Triplicates were included at each time point. The total RNA was isolated using TRIZOL and gene expression of microRNA-132 was quantified using real-time PCR.

Results: Upon in vitro wounding, migration of urothelial cells to the empty wounded surface was observed already after 12 hours. After 24 hours, cells had closed the scratched area almost totality. Real time quantitative PCR results showed a significant increase of miR-132 expression 6 hours after wounding.

Conclusion: Urothelial cells responded to the in vitro wound-healing assay by migration and converted the wounded area within 24 hours. Our expression analyses indicated that the migration of these cells might be modulated by the up-regulation of miR-132 after 6h, as occurs in other tissues. To confirm a direct relationship between miR-132 and migration, additional in vitro studies are needed in addition to in vivo bladder experiments in order to evaluate its clinical importance.

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Abbreviations

miRNA – MicroRNA miR-132 – MicroRNA-132 UTR – untranslated region

DGCR8 – Di George syndrome critical gene 8 RISC – RNA-induced silencing complex RT – Room temperature

ON – Over night

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Table of Contents

Abstract... 2

Abbreviations ... 3

1. Background ... 5

1.1 Tissue engineering and regenerative medicine in the urinary bladder ... 5

1.2 Histology of the urinary bladder ... 5

1.2.1 The urothelium ... 6

1.3 Wound healing ... 7

1.4 miRNA ... 7

1.4.1 Biogenesis of miRNAs... 7

1.4.2 miRNA in wound healing ... 8

1.4.3 miRNA-132 ... 8

2. Objective ... 8

2.1 Aim ... 8

2.2 Hypothesis ... 9

3. Method And Materials... 9

3.1 Urothelial cell isolation and growth ... 9

3.2 In vitro wound healing assay/scratch assay ... 9

3.3 miRNA RNA isolation/TRIZOL method ... 10

3.4 cDNA synthesis and quantitative real-time polymerase chain reaction (qPCR)10 3.5 Double delta Ct analysis ... 11

3.6 Statistics... 11

3.6 Ethics ... 12

4. Results ... 12

4.1 In vitro wound healing assay ... 12

4.2 miRNA-132 qPCR analysis ... 12

5. Discussion... 13

6. Conclusion ... 15

7. Acknowledgements ... 16

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1. Background

1.1 Tissue engineering and regenerative medicine in the urinary bladder Congenital malformations are common in the urogenital tract and symptoms can occur at different ages in the growing child: at the prenatal period, the pubertal period or as young adult. Adult bladders are also prone to anatomic and functional loss due to treatment of cancer, infections, denervation, trauma or other conditions in the urogenital tract that can lead to bladder damage [1].

In many of these cases patient morbidity is caused by a small and non-compliant bladder, which needs surgical reconstruction.

Although many techniques are effective, such as bladder augmentation with intestinal matter or bladder conduits for emptying, many of the current procedures often lead to complications. Thus, there is a strong clinical need for alternative therapies for these reconstructive procedures [2]. Alternative therapies could include tissue engineering techniques with cultured autologous urothelial cells or pharmacological treatments acting on the healing process.

In regenerative urogenital medicine, better understanding of normal bladder wound healing and its molecular mechanisms could be essential for developing new strategies that could increase treatment benefits and outcome in the future.

1.2 Histology of the urinary bladder

The urinary bladder consists of a mucosal layer, a submucosal layer, several smooth muscle layers and the adventitia. The mucosa consists of the urothelium, which lines the bladder lumen and consists of stratified transitional epithelial cells. The

urothelium is supported by the lamina propria and submucosa that can fold and unfold depending on the bladder volume. The submucosal consists of a dense irregular connective tissue and is, as the lamina propria, highly vascularized [3]. The

submucosal is followed by the smooth muscle of the bladder wall, which forms the detrusor muscle which contract to empty the bladder. It consists of three indistinct

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layers with both muscle and collagen bundles, these are randomly mixed with each other [3,4].

1.2.1 The urothelium

The urothelium covers the renal pelvis, ureter, bladder and the proximal urethra. It is organised in three layers. Firstly, a thin basement membrane, which has a single layer of basal cells resting on it. Secondly it has an intermediate region containing

columnar cells, and third a superficial layer of umbrella cells facing the lumen. The umbrella cells have tight intercellular junction complexes that protect the underlying cells against the cytotoxic effects of urine [3,5].

Moreover, the umbrella cells are characterised by the presence of two-dimensional crystals in their apical membrane called asymmetric unit membrane plaques. These plaques are formed by hexagonally packed uroplakin particles, which are specific interactions between integral membrane proteins [5,6]. It is thought that the plaques play a significant role in making the urothelium a functional impermeable barrier. The plaques accomplish this by reversibly adjusting the apical surface area as well as stabilising and preventing the urothelial apical membrane from rupturing during bladder distension [5].

Urothelium shares several characteristics qualities with other epithelia, for example skin, cornea and intestine. Some common characteristics include morphologic polarity; adherence via cell junctions; barrier function to protect the internal organs from damaging substances; and a basement membrane supporting basal cells that can regenerate all layers of the stratified epithelium [7]. Recent studies have indicated that urothelial cells proliferation not only take place in the basal layer, but also in the intermediate cell layers and mainly in the trigonum area [8].

The urothelium and other epithelial cells have several dissimilarities. For instance, the urothelium have a slower turnover rate in comparison to skin and intestinal mucosa. Also, the superficial layer of the urothelium has broader cells and is more elastic than other epithelial cells, which contributes to high compliance and distension capacity without loosing its barrier function during the micturition cycle [9]. Opposite to

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intestinal mucosa, that is permeable and differentiated for high absorption of nutrition and water, urothelium is differentiated towards an impermeable barrier epithelium. 1.3 Wound healing

In all organ systems the process of normal wound healing occurs in three main overlapping, yet distinct stages: inflammation, new tissue formation, and remodelling [10,11]. The first stage, which is the inflammatory phase, is characterized by

hemostasis and inflammation. The following stage – the new tissue formation – consists primarily of epithelialization, angiogenesis, granulation tissue formation and collagen deposition [10,12,13]. The last stage includes both maturation as well as remodelling and is characterized by a structured deposition of collagen [12,13].

This classical categorization of the wound healing process is mainly derived from studies in skin. Although studies suggest that these stages of wound healing also occur in the bladder, there is not a complete description of the bladders wound healing process and the molecular mechanisms regulating it [9].

1.4 miRNA

MiRNAs are a family of noncoding RNA approximately 22 nucleotides long that play a key role in the regulating gene expression [14]. It is estimated that miRNA account for 1-3 % of all genes in the genome [15] and is also responsible for the regulation of circa 60 % of coding genes [16]. They act by targeting mRNA transcripts, for

cleavage or translational repression [17]. Therefore, these molecules have an

important role in many biological processes, including cell proliferation, development and apoptosis [14].

1.4.1 Biogenesis of miRNAs

While most of the miRNA genes are transcribed as independent transcriptional units, it is assessed that 25 % of the miRNA genes belong to intronic regions of several coding genes [18]. Moreover, the biogenesis of miRNA occurs in a sequential manner. MiRNAs are transcribed from intragenic or intergenic DNA regions to long poly-adenylated transcripts called pri-miRNAs by RNA polymerase II and, less frequently, III [19]. In the nucleus the ribonuclease II Drosha or the double-stranded DNA-binding protein called DGCR8 [20] will then cleave the pri-miRNAs into a hairpin-shaped pre-miRNA [21]. The receptor complex exportin5-RAN/GTP will

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export the pre-miRNAs out of the nucleus to the cytoplasm. In the cytoplasm the ribonuclease III endonuclease named Dicer and the coregulator Ago2 will process the pre-miRNA to form small double-stranded miRNAs [19]. Lastly, one of strands will be degraded, while the other single-stranded miRNAs will be incorporated into RISC [20]. RISC will then either promote the degradation or inhibit the translation of target mRNAs by binding to the 3’-UTRs of the mRNA target, therefore regulating protein gene expression [19].

1.4.2 miRNA in wound healing

In the cutaneous wound healing process, changes in the expression of specific miRNA at specific phases of wound healing have been identified [13]. Studies here show that miRNA regulate everything from monocyte/macrophage differentiation, to

keratinocyte migration and re-epithelialization. However, the role of these molecules in bladder healing has not been investigated so far [22].

1.4.3 miRNA-132

Epithelial cell wound healing within skin and cornea in regards to miRNAs expression has been studied extensively, and miR-132 has been reported as a key regulator of cell proliferation as well as inflammatory chemokine and cytokine production in keratinocytes. During wound healing, up-regulation of miR-132 in keratinocytes may play a critical role in facilitating the transition from the inflammatory to proliferative phase [23].

There are studies showing that miR-132 is involved in bladder overactivity, in which up-regulation of miR-132 leads to detrusor muscle overactivity and bladder

hypertrophy [24]. However, there are no studies regarding the role of miR-132 in urothelial cell migration or proliferation in wound healing.

2. Objective

2.1 Aim

To measure the expression of miR-132 in human urothelial cells using an in vitro wound healing migration assay.

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2.2 Hypothesis

MicroRNA-132 is involved in urothelial cell wound healing.

3. Method And Materials

3.1 Urothelial cell isolation and growth

Otherwise discarded tissue of approximately 1 cm2 was harvested at surgery from a

6-week-old female undergoing bladder exstrophy closure. The biopsy was transported under sterile conditions to the laboratory in transport medium consisting of DMEM (Gibco). Once in the laboratory, the biopsy was placed into a sterile petri dish and the urothelial layer was mechanically separated from the underlying stroma and the smooth muscle layer using surgical scissors. The isolated tissue was washed in PBS (Gibco) 5 times. Next, the sample was treated with dispase II in HBSS at 2.4 U/ml for

3h in 37oC to loosen the cells from the tissue.

Thereafter, the dispase II was inactivated by diluting it in culture medium and the urothelial cells were scraped from the tissue carefully using the blunt side of a scalpel. The cells were collected by centrifugation at 350g for 5 min, and suspended in culture medium. The pellet was placed in a T25cm2 flask at a density of 1x105 cells/ cm2 in

culture medium consisting of a mix 4:1 of DMEN and Ham’s F12 (Gibco) supplemented with 10% fetal bovine serum (Gibco), insulin (5 mg/mL),

hydrocortisone (0.4 mg/mL), adenine (24 μg/mL; Sigma), cholera toxin (10−7 mM),

triiodothyronine (2×106 mM), transferrin (5 mg/mL), and antibiotics (penicillin

50 U/mL and streptomycin 50 mg/mL). Epidermal growth factor (10 ng/mL; Sigma) was added to the cell culture medium 24 h after plating.

Cells were expanded until sub-confluence and were then passaged by trypsination to a single cell suspension and expanded 1:3 at each passage.

3.2 In vitro wound healing assay/scratch assay

The urothelial cells were harvested at passage 2 and plated at 350 000 cells/60mm x 15 mm dish in 12 different dishes. They were then divided into three controls, and three for each of the different time points that was going to be studied: 6h, 12h and 24h. The medium was changed three times per week.

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After about 1 week the cells reached confluence and the scratch assay could be performed. 24h before making scratches, the cells were starved by changing medium to medium without FBS, to minimize the proliferation effect during the assay- The scratches were achieved by drawing 10 vertical lines and 10 horizontal lines using a 10µl pipette tip while still in the medium. Then the medium was changed in order to deplete cells being scratched off. Pictures were taken at 6h, 12h and 24h time points. The total RNA was collected using TRIZOL (Life Technology, Auckland, New Zeeland).

3.3 miRNA RNA isolation/TRIZOL method

1 ml TRIZOL (Life Technology, Auckland, New Zeeland) was added per well, and the cell lysates were passed several times through pipetting. The homogenized samples were then incubated for 5 min at R.T. Each well was transferred to an autoclaved 1,5 ml Eppendorf tube. 200 µl Chloroform was added to each tube. The tubes were shaken for 1 min and incubated at R.T. for 3 min and next the tubes were centrifuged at 12,000 x g for 15 min at 4oC. Meanwhile, 1µl glycogen was added to new RNase free Eppendorf 1,5ml tubes. After centrifugation, the aqueous phase was transferred to the RNase free tubes. Thereafter, 500µl Isopropyl alcohol was added to each RNase free tube and then vortexed and incubated at -20oC O.N.

The tubes were centrifuged at 12,000 x g for 10 min at 4oC. Next, the liquid

surrounding the RNA pellets in each tube were aspirated using a 1 ml pipette tip. They were respectively washed once with 1ml 75 % ethanol, vortexed and centrifuged at 7,500 x g for 5 minutes at 4oC. The liquid surrounding the pellet was aspirated

again and let to air-dry for 5-10 minutes. Moreover, the RNA was dissolved in 50µl RNase free water and lastly the concentration was measured by NanoDrop and stored at -70oC O.N.

3.4 cDNA synthesis and quantitative real-time polymerase chain reaction (qPCR)

The miRNA molecules were quantified by TaqMan Real-Time PCR according to the manufacturer’s instructions (Thermo Fisher Scientific, Foster City, CA, USA). Briefly, miRNA was reversely transcribed using the TaqMan MiRNA Reverse

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loop primers (Thermo Fisher Scientific, Foster City, CA, USA). The following program was used: 30 min 16°C, 30 min 42°C and 5 min 85°C. Diluted RT product (10 ng) was introduced into the 20-μl PCR reactions and incubated in 96-well plates of the QuantStudio7/Flex-Time PCR System (Thermo Fisher Scientific, Lithuania, EU) at 95°C for 10 minutes, followed by 40 cycles at 95°C for 15 seconds and at 60°C for 1 minute. The small nuclear RNA U6 was used as an internal control.

Data from the RT qPCR was analysed using a double delta Ct method, which analyses the relative changes in gene expression [25].

3.5 Double delta Ct analysis

Double delta Ct analysis is a commonly used and convenient method to analyze relative changes in gene expression from real-time quantitative PCR experiments. The main principle is to relate PCR signal of target transcript in a treatment group to that of another sample such as untreated control.

Collected data was imported to Excel. The samples that contained scratches and collected from different time points were considered as “treated group”, whereas the samples without scratches were considered as “control group”. miR-132 was our target gene and U6 was our house-keeping gene.

We used the equation POWER(2;-(CtmRr132-CtU6)) to get the relative expression level

of miR-132 by comparing with the internal control gene U6. By using the result from previous equation, we calculate the average expression level of “control group” – AVERAGE (“control group”). Therefore, we normalized each sample’s expression level of miR-132 (including “control group” itself) with the AVERAGE (“control group”), which will give the results of fold-change from each sample compared with “control group”.

3.6 Statistics

Unpaired, two-tailed Student’s t-test was used to identify significant differences in the relative expression of miR-132 between the control and the different time points. P value ≤ 0,05 was considered statistically significant for the tests. Statistics and all

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graphs were calculated using GraphPad Prism 7 (GraphPad Software Inc., La Jolla, USA)

3.6 Ethics

Tissue harvesting was approved by the regional ethical review in Stockholm.

4. Results

4.1 In vitro wound healing assay

The microscopic pictures of the human urothelial cell culture at time point 6h, 12h and 24h after the scratches are presented in figure 1. It is evident that the cell

migration already starts taking place from an early time point. After 12h the migration of cells around the wound edges are even more apparent, and the picture of time point 24h showed that the wound gap was almost completely closed in some areas.

Figure 1: The stages of migration of urothelial cells at different time points

4.2 miRNA-132 qPCR analysis

The expression levels of miR-132 from different time points, demonstrated as fold change, are presented in figure 2. It illustrates that there is a variation in main fold expression between the triplicates from the different time points.

According to Student’s t-test the only time point with a significant difference occurred at the 6h time point (p=0.0194). The other time points all showed an

increase of miR-132 expression compared to controls, however, with no significance (p-value: 12h= 0.2418; 24h=0.0792).

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5. Discussion

In this study, we found a significant up-regulation of mir-132 on the 6h time point after scratching. To our knowledge, the expression of miR-132 has previously never been studied regarding its roll in bladder wound healing. However, there are studies of its role in transition from the inflammatory to proliferation phase in skin wound healing [23], and also in regards to bladder overactivity and hypertrophy [24].

This in vitro 2D-scratch assay is a common method of choice for studying cell migration. This is mainly because it is relatively simple and cheap and most of the materials are usually available at any laboratories that perform cell culture [26]. Another advantage is that the process is a simplification of what occurs in vitro and involves fewer complex cell interactions that could obscure the action of miR-132.

The limitations of the method are related to its in vitro nature. Many of the natural components of the wound healing process are not present, and the cells may not behave in the same manner in vivo [26]. By these means the three stages of wound

Figure 2: miR-132 expression at time point 6h, 12h and 24h. p-value (6h: 0.0194, 12h: 0.2418, 24h: 0.0792)

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healing: inflammation, proliferation and remodelling cannot be mimicked using this method.

By depleting serum from the medium, we could study migration in the first hours of the in vitro experiment, as proliferation of urothelial cells should not have affected the wound closure. By these means the cells were starved 24h before making the

scratches and under these conditions cell division take longer time. Cell proliferation may however play a role at later time points, and might be needed for a complete closure of the gap.

Despite the dissimilarities to in vivo condition, the in vitro the scratch assay showed an initial wound healing reaction that was characterized by a cell migration to close the gap and a significant up-regulation of miR-132 expression in the wounded urothelial cells after 6h. This result indicates that miR-132 potentially plays an important role in urothelial wound healing.

Moreover, studies regarding miR-132 in skin explain the potential role of miR-132 in wound healing. In vivo studies on human cells from the skin have showed that during a wound healing process, the miR-132 increase during the inflammatory stage, and reach its peak during the proliferative stage. [23] However, because of limitation with the in vitro model, the bladder wound healing assay itself is not enough to indicate a similar pattern of miR-132 regulation in the urinary bladder. For this, similar in vivo studies in the urinary bladder need to be performed.

In general we observed a moderate up-regulation of the miRNA-132 that was significant only at the 6 hours time point. It is possible that the regulation of this miRNA could occur much earlier than after 6 hours, and that we failed in detecting the peak of up-regulation. In the skin, it has been shown that gene expression of cells in the wound edges differ from the non-injured skin. In vitro, it is difficult to estimate whether gene expression is different in cells from the wounded edge contra cells further away.

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wound. Looking at figure 1, the urothelial cells got more confluent after every time point, which means the wound was also reducing in size. When extracting the RNA, the RNA from the whole dish was isolated, which means it was from both wounded and unwounded cells. Due to the wound getting smaller after every time point there will consequently be lesser amount of RNA from wounded cells in the total RNA isolation than the earlier time points. Thus, the results might not be representative to what the actual expression of miR-132 was in the specific wounded areas. Due to this, it might be important to change future experiments to earlier time points in order to minimalize the effect of isolating RNA from unwounded urothelial cells.

In addition, there are several factors that could have affected the outcome of the results and also the variation of miR-132 expression in the triplicates in time point 12h and 24h, making them not significant. Firstly, the urothelial cells from the biopsy were from a female patient with bladder exstrophy, thereby not from a completely healthy bladder. This could have an impact on the cells ability to express miR-132 and might be different from healthy urothelium.

Secondly, when handling different samples and solutions in very small measurements, there is always a risk of pipetting error. This could have happened especially during the preparations for the RT qPCR due to the quantity of the samples being particularly small. Similarly, the RNA pellet from the RNA isolation could easily break if the part of the RNA pellet that was unintentionally removed consisted of the majority of the miR-132, it would not show a representative value of miR-132 from those urothelial cells.

6. Conclusion

The aim of this study was to measure the expression of miR-132 in human urothelial cells using an in vitro wound healing migration assay. The results indicate urothelial cells acted on in vitro wounding by scratching and responded to it by migration and closed the gap within the first 24 hours. Our results showed that 6 hours after scratches were made, there was a significant increase of miRNA-132. Additional experiments are needed in order to further validate these results and to find the effects

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of the miRNA-132 in different processes associated with urothelial wound healing, including proliferation and migration.

7. Acknowledgements

I would like to express my special thanks of gratitude to my supervisor Clara Ibel Chamorro for providing me with scientific guidance while writing this essay, and for always encouraging me to learn new methods, not only in laboratory work concerning this essay, but also other methods regarding this field of research. I would also like to extend my gratitude to my supervisor Magdalena Fossum for all your support during the writing process and for sharing your knowledge and experience. Nevertheless, I would like to thank doctoral student Xi Liu for all your help and guidance in the lab as well as your patience and support during the writing process, helping me overcome different obstacles through the course of this essay. Lastly, I have to express

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8. References

1. Sack, B.S., Mauney, J.R. & Estrada, C.R. Silk Fibroin Scaffolds for Urologic Tissue Engineering. Curr Urol Rep. 2016; 17: 16.

2. Smolar J, Salemi S, Horst M, Sulser T, Eberli D. Stem Cells in Functional Bladder Engineering. Transfusion Medicine and Hemotherapy. 2016;43(5):328-335. doi:10.1159/000447977.

3. Mescher AL. Junqueira's Basic Histology Text and Atlas. 13th ed. USA: McGraw-Hill Education; 2013.

4. Ross MH, Pawlina W. Histology, A Text and Atlas. 6th ed. USA: Lippincott Willims & Wilkins; 2011.

5. Sun TT. Altered phenotype of cultured urothelial and other stratified epithelial cells: implications for wound healing. Am J Physiol Renal Physiol 2006;291: F9-21.

6. Bolland F, Southgate J. Bio-engineering urothelial cells for bladder tissue transplant. Expert Opin Biol Ther 2008; 8: 1039-1049.

7. Ross MH, Pawlina W (2006) Histology: a text and atlas: with correlated cell and molecular biology. Lippincott Williams & Wilkins, Philadelphia.

8. Sun W, Wilhelmina Aalders T, Oosterwijk E. Identification of potential bladder progenitor cells in the trigone. Dev Biol 2014;393: 84-92.

9. Larsson P, Chamorro CI, Fossum M. A Review on Bladder Wound Healing after Mechanical Injury. J Tissue Sci Eng 2014;7: 170.

doi:10.4172/2157-7552.1000170.

10. Gurtner GC, Werner S, Barrandon Y, Longaker MT. Wound repair and regeneration. Nature 2008 May 15;453(7193):314-21.

.

11. Werner S and Grose R. Regulation of wound healing by growth factors and cytokines. Physiol Rev 2003; 83(3): 835–870.

12. Broughton G., II, Janis J. E., Attinger C. E. Wound healing: an overview. Plastic and Reconstructive Surgery. 2006;117(7) doi:

10.1097/01.prs.0000222562.60260.f9.

13. Shilo S, Roy S, Khanna S, Sen CK: MicroRNA in cutaneous wound healing: a new paradigm. DNA and cell biology 2007, 26(4):227-237).

14. Bartel DP. MicroRNAs: Genomics, Biogenesis, Mechanism, and Function. Cell 2004 1/23;116(2):281-297.

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15. Zhao Y, Srivastava D. A developmental view of microRNA function. Trends Biochem Sci 2007 4;32(4):189-197.

16. Friedman RC, Farh KK-H, Burge CB, Bartel DP. Most mammalian mRNAs are conserved targets of microRNAs. Genome Research. 2009;19(1):92-105. 17. Lewis BP, Shih I, Jones-Rhoades MW, Bartel DP, Burge CB. Prediction of

Mammalian MicroRNA Targets. Cell 2003 12/26;115(7):787-798.

18. Sung-Chou Li, Petrus Tang, and Wen-Chang Lin. DNA and Cell Biology. 2007, 26(4): 195-207. doi:10.1089/dna.2006.0558.

19. Gennari, L., Bianciardi, S. & Merlotti, D. Osteoporos Int (2016). doi:10.1007/s00198-016-3847-5.

20. Winter J, Jung S, Keller S, Gregory RI, Diederichs S. Many roads to maturity: microRNA biogenesis pathways and their regulation. Nat Cell Biol. 2009, 11:228–234. doi:10.1038/ncb0309-228.

21. Han J, Lee Y, Yeom K-H, Kim Y-K, Jin H, Kim VN. The Drosha-DGCR8 complex in primary microRNA processing. Genes & Development. 2004;18(24):3016-3027. doi:10.1101/gad.1262504.

22. Lai, WF. & Siu, P.M. MicroRNAs as regulators of cutaneous wound healing. J Biosci. 2014, 39: 519. .

23. Li D, Wang A, Liu X, et al. MicroRNA-132 enhances transition from

inflammation to proliferation during wound healing. The Journal of Clinical Investigation. 2015;125(8):3008-3026.

24. Kashyap M, Pore S, Chancellor M, Yoshimura N, Tyagi P. Bladder overactivity involves overexpression of MicroRNA 132 and nerve growth factor. Life Sci 2016 12/15;167:98-104.

25. Livak KJ, Schmittgen TD. Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method. Methods 2001 December 2001;25(4):402-408.

26. Kramer N, Walzl A, Unger C, Rosner M, Krupitza G, Hengstschläger M, et al. In vitro cell migration and invasion assays. Mutation Research/Reviews in Mutation Research 2013 0;752(1):10-24.

References

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