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Molecular Biotechnology Programme Uppsala University School of Engineering

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Molecular Biotechnology Programme

Uppsala University School of Engineering

UPTEC X 07 035 Date of issue 2007-06

Author

Daniel Kamsund

Title (English)

Synthetic biology – characterizing promoters and evaluating the methods

Title (Swedish) Abstract

Synthetic biology is a new genetic engineering approach built on: (i) a complexity hierarchy of parts (e.g. promoters), devices and systems, and (ii) standardization. I have evaluated fluorescence imaging, microscopy imaging and Northern blotting as methods to characterize and quantify the strength of individual promoters. Three different promoters were assembled with fluorescent protein constructs, using the BioBrick system, and characterized.

Quantifications revealed that the promoters behaved like the theoretical models predicted and fluorescence imaging was found to be the most robust quantification method.

Keywords

Synthetic biology, BioBrick, genetic engineering, promoters, promoter characterization, fluorescence imaging, fluorescence microscopy, Northern blotting.

Supervisors

Prof. Peter Lindblad Dr. Thorsten Heidorn

Department of Photochemistry and Molecular Science, Uppsala University Scientific reviewer

Assoc. Prof. Lage Cerenius

Department of Physiology and Developmental Biology, Uppsala University

Project name Sponsors

Language

English

Security

ISSN 1401-2138

Classification

Supplementary bibliographical information Pages

38

Biology Education Centre Biomedical Center

Husargatan 3 Uppsala Box 592 S-75124 Uppsala Tel +46 (0)18 4710000 Fax +46 (0)18 555217

References

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