Molecular Biotechnology Programme
Uppsala University School of Engineering
UPTEC X 07 035 Date of issue 2007-06
AuthorDaniel Kamsund
Title (English)
Synthetic biology – characterizing promoters and evaluating the methods
Title (Swedish) Abstract
Synthetic biology is a new genetic engineering approach built on: (i) a complexity hierarchy of parts (e.g. promoters), devices and systems, and (ii) standardization. I have evaluated fluorescence imaging, microscopy imaging and Northern blotting as methods to characterize and quantify the strength of individual promoters. Three different promoters were assembled with fluorescent protein constructs, using the BioBrick system, and characterized.
Quantifications revealed that the promoters behaved like the theoretical models predicted and fluorescence imaging was found to be the most robust quantification method.
Keywords
Synthetic biology, BioBrick, genetic engineering, promoters, promoter characterization, fluorescence imaging, fluorescence microscopy, Northern blotting.
Supervisors
Prof. Peter Lindblad Dr. Thorsten Heidorn
Department of Photochemistry and Molecular Science, Uppsala University Scientific reviewer
Assoc. Prof. Lage Cerenius
Department of Physiology and Developmental Biology, Uppsala University
Project name Sponsors
Language
English
SecurityISSN 1401-2138
ClassificationSupplementary bibliographical information Pages