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Molecular Biotechnology Programme Uppsala University School of Engineering UPTEC X 01 008

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Molecular Biotechnology Programme Uppsala University School of Engineering UPTEC X 01 008

Date of issue 2001-01 Author

Kristina Engdahl

Title (English)

A tool for graphical visualisation and analysis of genomic sequences

Title (Swedish) Abstract

A graphical tool for the visualisation and analysis of genomic sequence data has been implemented using object-oriented modelling and Java. In a user-friendly interface, a set of sub-sequences is aligned to a known reference sequence in EMBL-format. The features of the EMBL-entry are displayed and it is possible to extract specific regions from the subset in well-established file-formats for further analysis.

Keywords

Evolutionary analysis, visualisation, object-oriented modelling, CORBA Supervisors

Tomas Bergström Uppsala Universitet Examiner

Ulf Gyllensten Uppsala Universitet

Project name Sponsors

Language

English

Security

ISSN 1401-2138 Classification

Supplementary bibliographical information Pages

26

Biology Education Centre Biomedical Center Husargatan 3 Uppsala Box 592 S-75124 Uppsala Tel +46 (0)18 4710000 Fax +46 (0)18 555217

References

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